- Hoeksema, W.; van der Loos, M.; van Moorsel, M. (2022). Coral diversity matches marine park zonation but not economic value of coral reef sites at St. Eustatius, eastern Caribbean. J. Environ. Manage. 320: 115829. https://dx.doi.org/10.1016/j.jenvman.2022.115829, meer
- Hoeksema, B.W.; Giyanto; Suharsono (2019). The role of maximum shelf depth versus distance from shore in explaining a diversity gradient of mushroom corals (Fungiidae) off Jakarta. Diversity 11(3): 46. https://dx.doi.org/10.3390/d11030046, meer
- Kunihiro, S.; Farenzena, Z.; Hoeksema, B.W.; Groenenberg, D.S.J.; Hermanto, B.; Reimer, J.D. (2019). Morphological and phylogenetic diversity of Waminoa and similar flatworms (Acoelomorpha) in the western Pacific Ocean. Zoology (Jena) 136: 125692. https://dx.doi.org/10.1016/j.zool.2019.06.002, meer
- Shelyakin, P.V.; Garushyants, S.K.; Nikitin, M.A.; Mudrova, S.V.; Berumen, M.L.; Speksnijder, A.G.C.L.; Hoeksema, B.W.; Fontaneto, D.; Gelfand, M.S.; Ivanenko, V.N. (2018). Microbiomes of gall-inducing copepod crustaceans from the corals Stylophora pistillata (Scleractinia) and Gorgonia ventalina (Alcyonacea). NPG Scientific Reports 8(1): 10 pp. https://dx.doi.org/10.1038/s41598-018-29953-y, meer
- Tarya, A.; Hoitink, A.J.F.; van der Vegt, M.; van Katwijk, M.M.; Hoeksema, B.W.; Bouma, T.J.; Lamers, L.P. M.; Christianen, M.J.A. (2018). Exposure of coastal ecosystems to river plume spreading across a near-equatorial continental shelf. Cont. Shelf Res. 153: 1-15. https://dx.doi.org/10.1016/j.csr.2017.12.003, meer
- Valderrama Ballesteros, L.; Matthews, J.L.; Hoeksema, B.W. (2018). Pollution and coral damage caused by derelict fishing gear on coral reefs around Koh Tao, Gulf of Thailand. Mar. Pollut. Bull. 135: 1107-1116. https://dx.doi.org/10.1016/j.marpolbul.2018.08.033, meer
- Hoeksema, B.W.; van Beusekom, M.; ten Hove, H.A.; Ivanenko, V.N.; van der Meij, S.E.T.; van Moorsel, G.W.N.M. (2016). Helioseris cucullata as a host coral at St. Eustatius, Dutch Caribbean. Mar. Biodiv. 47(1): 71-78. https://dx.doi.org/10.1007/s12526-016-0599-6, meer
- Fransen, C.H.J.M.; Hoeksema, B.W. (2014). Going for the stars: extending the host record for the reef-dwelling Emperor shrimp, Periclimenes imperator (Pontoniinae). Mar. Biodiv. 44(4): 465-466. https://dx.doi.org/10.1007/s12526-014-0210-y, meer
- Hoeksema, B.W.; Dekker, F.; de Voogd, N.J. (2014). Free-living mushroom corals strike back by overtopping a coral-killing sponge. Mar. Biodiv. 44(1): 3-4. https://dx.doi.org/10.1007/s12526-013-0188-x, meer
- Costello, M.J.; Bouchet, P.; Boxshall, G.; Fauchald, K.; Gordon, D.; Hoeksema, B.W.; Poore, G.C.B.; Van Soest, R.W.M.; Stöhr, S.; Walter, T.C.; Vanhoorne, B.; Decock, W.; Appeltans, W. (2013). Global coordination and standardisation in marine biodiversity through the World Register of Marine Species (WoRMS) and related databases. PLoS One 8(1): 20 pp. https://dx.doi.org/10.1371/journal.pone.0051629, meer
- Hoeksema, B.W. (2013). Erratum to: Extreme morphological plasticity enables a free mode of life in Favia gravida at Ascension Island (South Atlantic). Mar. Biodiv. 43(2): 173. http://dx.doi.org/10.1007/s12526-012-0128-1, meer
- Hoeksema, B.W.; van der Meij, S.E.T. (2013). Editorial: Corals, reefs and marine biodiversity. Mar. Biodiv. 43(1): 1-6. http://dx.doi.org/10.1007/s12526-013-0145-8, meer
- Santodomingo, N.; Reyes, J.; Flórez, P.; Chacón-Gómez, I.C.; van Ofwegen, L.P.; Hoeksema, B.W. (2013). Diversity and distribution of azooxanthellate corals in the Colombian Caribbean. Mar. Biodiv. 43(1): 7-22. http://dx.doi.org/10.1007/s12526-012-0131-6, meer
- van der Meij, S.E.T.; Hoeksema, B.W. (2013). Distribution of gall crabs inhabiting mushroom corals on Semporna reefs, Malaysia. Mar. Biodiv. 43(1): 53-59. https://dx.doi.org/10.1007/s12526-012-0135-2, meer
- Waheed, Z.; Hoeksema, B.W. (2013). A tale of two winds: species richness patterns of reef corals around the Semporna peninsula, Malaysia. Mar. Biodiv. 43(1): 37-51. http://dx.doi.org/10.1007/s12526-012-0130-7, meer
- Appeltans, W.; Ahyong, S.T.; Anderson, G.; Angel, M.V.; Artois, T.; Bailly, N.; Bamber, R.N.; Barber, A.; Bartsch, I.; Berta, A.; Blazewicz-Paszkowycz , M.; Bock, P.; Boxshall, G.; Boyko, C.B.; Nunes Brandão, S.; Bray, R.A.; Bruce, N.L.; Cairns, S.D.; Chan, T.-Y.; Cheng, L.; Collins, A.G.; Cribb, T.H.; Curini-Galletti, M.; Dahdouh-Guebas, F.; Davie, P.J.F.; Dawson, M.N.; De Clerck, O.; Decock, W.; De Grave, S.; de Voogd, N.J.; Domning, D.P.; Emig, C.C.; Erséus, Ch.; Eschmeyer, W.; Fauchald, K.; Fautin, D.G.; Feist, S.W.; Fransen, C.H.J.M.; Furuya, H.; García-Alvarez, O.; Gerken, S.; Gibson, D.; Gittenberger, A.; Gofas, S.; Gómez-Daglio, L.; Gordon, D.P.; Guiry, M.D.; Hernandez, F.; Hoeksema, B.W.; Hopcroft, R.R.; Jaume, D.; Kirk, P.; Koedam, N.; Koenemann, S.; Kolb, J.B.; Kristensen, R.M.; Kroh, A.; Lambert, G.; Lazarus, D.B.; Lemaitre, R.; Longshaw, M.; Lowry, J.; MacPherson, E.; Madin, L.P.; Mah, C.; Mapstone, G.; McLaughlin, P.A.; Mees, J.; Meland, K.; Messing, C.G.; Mills, C.E.; Molodtsova, T.N.; Mooi, R.; Neuhaus, B.; Ng, P.K.L.; Nielsen, C.; Norenburg, J.; Opresko, D.M.; Osawa, M.; Paulay, G.; Perrin, W.; Pilger, J.F.; Poore, G.C.B.; Pugh, Ph.R.; Read, G.B.; Reimer, J.D.; Rius, M.; Rocha, R.M.; Sáiz Salinas, J.I.; Scarabino, V.; Schierwater, B.; Schmidt-Rhaesa, A.; Schnabel, K.E.; Schotte, M.; Schuchert, P.; Schwabe, E.; Segers, H.; Self-Sullivan, C.; Shenkar, N.; Siegel, V.; Sterrer, W.; Stöhr, S.; Swalla, B.; Tasker, M.L.; Thuesen, E.V.; Timm, T.; Todaro, M.A.; Turon, X.; Tyler, S.; Uetz, P.; van der Land, J.; Vanhoorne, B.; van Ofwegen, L.P.; Van Soest, R.W.M.; Vanaverbeke, J.; Walker-Smith, G.K.; Walter, T.C.; Warren, A.; Williams, G.C.; Wilson, S.P.; Costello, M.J. (2012). The magnitude of global marine species diversity. Curr. Biol. 22(23): 2189-2202. http://dx.doi.org/10.1016/j.cub.2012.09.036, meer
- Hoeksema, B.W. (2012). Extreme morphological plasticity enables a free mode of life in Favia gravid at Ascension Island (South Atlantic). Mar. Biodiv. 42(2): 289-295. http://dx.doi.org/10.1007/s12526-011-0106-z, meer
- Hoeksema, B.W.; Roos, P.J.; Cadée, G.C. (2012). Trans-Atlantic rafting by the brooding reef coral Favia fragum on man-made flotsam. Mar. Ecol. Prog. Ser. 445: 209-218. dx.doi.org/10.3354/meps09460, meer
- Hoeksema, B.W.; van der Meij, S.E.T.; Fransen, C.H.J.M. (2012). The mushroom coral as a habitat. J. Mar. Biol. Ass. U.K. 92(4): 647-663. http://dx.doi.org/10.1017/S0025315411001445, meer
- Hoeksema, B.W.; Waheed, Z. (2012). It pays to have a big mouth: mushroom corals ingesting salps at northwest Borneo. Mar. Biodiv. 42(2): 297-302. http://dx.doi.org/10.1007/s12526-012-0110-y, meer
- Reimer, J.D.; Lin, M.; Fujii, T.; Lane, D.J.W.; Hoeksema, B.W. (2012). The phylogenetic position of the solitary zoanthid genus Sphenopus (Cnidaria: Hexacorallia). Contributions to Zoology 81(1): 34-54, meer
- Carpenter, K.E.; Abrar, M.; Aeby, G.; Aronson, R.B.; Banks, S.; Bruckner, A.; Chiriboga, A.; Cortés, J.; Delbeek, J.C.; DeVantier, L.; Edgar, G.J.; Edwards, T.M.; Fenner, D.; Guzmán, H.M.; Hoeksema, B.W.; Hodgson, G.; Johan, O.; Licuanan, W.Y.; Livingstone, S.R.; Lovell, E.R.; Moore, J.A.; Obura, D.O.; Ochavillo, D.; Polidoro, B.A.; Precht, W.F.; Quibilan, M.C.; Reboton, C.; Richards, Z.T.; Rogers, A.D.; Sanciango, J.; Sheppard, A.; Sheppard, C.; Smith, J.; Stuart, S.; Turak, E.; Veron, J.E.N.; Wallace, C.; Weil, E.; Wood, E. (2008). One-third of reef-building corals face elevated extinction risk from climate change and local impacts. Science (Wash.) 321(5888): 560-563, meer
- Hoeksema, B.W.; Cleary, D.F.R. (2004). The sudden death of a coral reef. Science (Wash.) 303(5662): 1293-1994, meer
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- Van Bruggen, A.C.; Hoeksema, B.W. (2012). In memoriam Dr Jacob van der Land (1935-2011), late marine biologist at the Leiden Museum (1964-2000). Zool. Meded. 86: 506-515, meer
- Hoeksema, B.W.; Kleemann, K. (2002). New records of Fungiacava eilatensis Goreau et al., 1968 (Bivalvia, Mytilidae) boring into Indonesian mushroom corals (Scleractinia, Fungiidae). Basteria 66: 25-30, meer
- Kleemann, K.; Hoeksema, B.W. (2002). Lithophaga (Bivalvia, Mytilidae), including a new species, boring into mushroom corals (Scleractinia, Fungiidae) off South Sulawesi, Indonesia. Basteria 66: 11-24, meer
- Hoeksema, B.W. (1991). Evolution of body size in mushroom corals (Scleractinia: Fungiidae) and its ecomorphogical consequences. Neth. J. Zool. 41(2-3): 112-129, meer
- Borel Best, M.; Hoeksema, B.W.; Moka, W.; Moll, A.; Suharsono; Nyoman Sutarna, I. (1989). Recent scleractinian coral species collected during the Snellius-II Expedition in eastern Indonesia. Neth. J. Sea Res. 23(2): 107-115. https://dx.doi.org/10.1016/0077-7579(89)90005-7, meer
- Hoeksema, B.W. (1989). Taxonomy, phylogeny and biogeography of mushroom corals (Scleractina: Fungiidae). Zoologische Verhandelingen, 254. Rijksmuseum van Natuurlijke Historie Leiden: Leiden. 295, 678 fig. plates 1-6 pp., meer
- Hoeksema, B.W.; Moka, W. (1989). Species assemblages and phenotypes of mushroom corals (Fungiidae) related to coral reef habitats in the Flores Sea. Neth. J. Sea Res. 23(2): 149-160, meer
- Hoeksema, B.W. (1981). Het erwtekrabbetje, Pinnotheres pisum (L.), als commensaal van de paardemossel, Modiolus modiolus (L.). Het Zeepaard 41(3): 79, meer
- Hoeksema, B.W. (1981). Rugschilden en eiersnoeren van Alloteuthis subulata (Lamarck, 1978). Het Zeepaard 41(5): 144-146, meer
- Hoeksema, B.W.; Hoeksema, D. (1979). Naar aanleiding van een Loligo, rugschilden, invasie op Terschelling. Het Zeepaard 39(1): 13-24, meer
- Hoeksema, B.W. (1978). Vinstralen in vis en gruis. Het Zeepaard 38(5/6): 116-121, meer
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